Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq2363 286 3e-73 >seq2363 Length=476791 Score = 286 bits (316), Expect = 3e-73 Identities = 161/163 (99%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 120797 AGGAGGTTTGAAATGGACCGGGAACCTAAAAGTGCCAGATACTGTGCTGAGTGTAATAGG 120738 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 120737 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 120678 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 120677 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 120635 Score = 145 bits (160), Expect = 6e-31 Identities = 83/85 (98%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 120554 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 120495 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 |||||||||||||||| |||||||| Sbjct 120494 ACATCTCATTTGGTTCGCGGATGCC 120470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39886786798236