Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq552 401 5e-108
seq549 269 2e-68
>seq552
Length=1099332
Score = 401 bits (444), Expect = 5e-108
Identities = 270/301 (90%), Gaps = 3/301 (1%)
Strand=Plus/Minus
Query 4959 AAGACTCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAA 5018
|||| |||| ||||| | |||||||| ||||||| | ||||||||||||||||||||||
Sbjct 1015673 AAGAGGCAATAAATACTACGATGTGCAGCCGATGCTAAGGAAAGCATAGGAGGTTTGAAA 1015614
Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078
|||||| ||||||||||| |||||||||||||||||||||||| ||||||||||| |||
Sbjct 1015613 TGGACCAGGAACCTAAGAATGCCAGATACTGTGCTGAGTGTAACAGGCTGCATCCCACTG 1015554
Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138
| |||| | ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1015553 AAGAAGAT---TTTTGGGCAGAGTCAAGCATGTTGGGCCTGAAGATCACCTACTTTGCGC 1015497
Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198
||||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||
Sbjct 1015496 TGATGGATGGAAAGGTGTATGCCATCACAGAGTGGGCTAGATGTCAGCGTGTGGAAATCT 1015437
Query 5199 CCCCAGATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCA 5258
| |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| ||||
Sbjct 1015436 CTCCAGATACCCACAGAGTCCCCTATCACATCTCATTTGGTTCTCGGATCCCAGGCACCA 1015377
Query 5259 G 5259
|
Sbjct 1015376 G 1015376
>seq549
Length=1240072
Score = 269 bits (298), Expect = 2e-68
Identities = 158/164 (96%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 413664 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 413605
Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124
||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 413604 GCTGCATCCCGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTGAAGAT 413545
Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct 413544 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 413501
Score = 140 bits (154), Expect = 3e-29
Identities = 100/114 (88%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 413421 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGGGTCCCCTATC 413362
Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTG 5279
||||| |||||||||| ||||| |||| ||||| | | || ||||| | |||
Sbjct 413361 ACATCTCATTTGGTTCTCGGATCCCAGCCACCAGTGGGC-GACAGAGGTAGGTG 413309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40207775061304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |