Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptonychotes_20weddellii_20[refseq_20GCF_5F000349705.1_202013-03-
29] 16,711 sequences; 3,156,902,762 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq674 378 6e-101
seq109 269 2e-68
>seq674
Length=1058379
Score = 378 bits (418), Expect = 6e-101
Identities = 250/279 (90%), Gaps = 10/279 (4%)
Strand=Plus/Minus
Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053
|| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 623487 ATATGCAGCCGGTGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCGAAGAGT 623428
Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 623427 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGAGACTTCTGGGCA 623368
Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173
||||| |||||| |||||||||| |||||||| | ||| |||||||||||||||||||||
Sbjct 623367 GAGTCAAGCATGCTGGGCCTCAAGATCACCTATTCTGCACTGATGGATGGAAAGGTGTAT 623308
Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGA--- 5230
|| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 623307 GACCTCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCCCAGATGC 623248
Query 5231 -------GTCCCTTGTCACATCTCATTTGGTTCACGGAT 5262
||||| | |||||||||||||||||| | |||
Sbjct 623247 CCCCAGGGTCCCCTATCACATCTCATTTGGTTCTCAGAT 623209
>seq109
Length=2443272
Score = 269 bits (298), Expect = 2e-68
Identities = 158/164 (96%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2056432 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 2056373
Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct 2056372 GCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 2056313
Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
|||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 2056312 CACCTATTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 2056269
Score = 134 bits (148), Expect = 1e-27
Identities = 80/84 (95%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 2056188 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATCA 2056129
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
||||||||||||||| ||||| ||
Sbjct 2056128 CATCTCATTTGGTTCTCGGATTCC 2056105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40110857790948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |