Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lipotes_20vexillifer_20[refseq_20GCF_5F000442215.1_202013-07-31]
30,713 sequences; 2,429,212,129 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq30698 114 7e-23
seq17321 114 7e-23
seq21249 93.3 2e-16
>seq30698
Length=1458934
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 623177 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 623118
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 623117 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 623091
>seq17321
Length=2090019
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 570617 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 570676
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 570677 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 570703
>seq21249
Length=1240507
Score = 93.3 bits (102), Expect = 2e-16
Identities = 79/91 (87%), Gaps = 5/91 (5%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||| | ||
Sbjct 41886 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCATC-CC 41828
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
|| ||||| |||| || || | ||||||||
Sbjct 41827 CCAGCGCGG-CGGG-CG-AG-AGGGGCCGGT 41801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2859893905074
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |