Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq58810 246 2e-61 >seq58810 Length=7929 Score = 246 bits (272), Expect = 2e-61 Identities = 153/164 (93%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6062 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 6121 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 ||||||||| ||||| ||||| ||||||||||||||||| || ||||||||||| || || Sbjct 6122 GCTGCATCCCGCTGAAGAAGGCGACTTTTGGGCAGAGTCAAGTATGTTGGGCCTGAAGAT 6181 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 || || ||||||||||||||||||||||||||||| ||||||| Sbjct 6182 TACGTATTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 6225 Score = 127 bits (140), Expect = 2e-25 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | || Sbjct 6305 CAGAATGGGCTGGATGCCAACGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 6364 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 |||||||||||||||| ||||| || Sbjct 6365 ACATCTCATTTGGTTCTCGGATCCC 6389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40031350694496