Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq674 250 2e-62 >seq674 Length=992603 Score = 250 bits (276), Expect = 2e-62 Identities = 153/163 (94%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 145184 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGGTACTGTGCTGAGTGTAATAGG 145243 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct 145244 CTGCATCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGTATGTTGGGCCTCAAGATC 145303 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 |||| |||||| |||||||| ||||| |||||||| ||||||| Sbjct 145304 ACCTTCTTTGCACTGATGGACGGAAAAGTGTATGACATCACAG 145346 Score = 140 bits (154), Expect = 3e-29 Identities = 100/114 (88%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225 ||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||| Sbjct 145413 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCACAGAGTGCCCTATC 145472 Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTG 5279 ||||| |||||||||| ||||| ||||| ||||| | | || ||||| | ||| Sbjct 145473 ACATCTCATTTGGTTCTCGGATCCCAGGAACCAGTGGGC-GACAGAGGTAGGTG 145525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40210625934856