Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06-
02] 7,783 sequences; 2,410,879,678 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq179 260 1e-65
>seq179
Length=4360684
Score = 260 bits (288), Expect = 1e-65
Identities = 156/164 (95%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 394307 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 394248
Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct 394247 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 394188
Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
|||||| ||||| |||||||||||||| |||||||| |||||||
Sbjct 394187 CACCTATTTTGCACTGATGGATGGAAAAGTGTATGACATCACAG 394144
Score = 125 bits (138), Expect = 6e-25
Identities = 78/84 (93%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct 394063 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCACAGAGTCCCCTATCA 394004
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
|||||| |||||||| ||||| ||
Sbjct 394003 CATCTCCTTTGGTTCTCGGATTCC 393980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40114887283044
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |