Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq179 260 1e-65 >seq179 Length=4360684 Score = 260 bits (288), Expect = 1e-65 Identities = 156/164 (95%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 394307 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 394248 Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || Sbjct 394247 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 394188 Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 |||||| ||||| |||||||||||||| |||||||| ||||||| Sbjct 394187 CACCTATTTTGCACTGATGGATGGAAAAGTGTATGACATCACAG 394144 Score = 125 bits (138), Expect = 6e-25 Identities = 78/84 (93%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct 394063 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCACAGAGTCCCCTATCA 394004 Query 5242 CATCTCATTTGGTTCACGGATGCC 5265 |||||| |||||||| ||||| || Sbjct 394003 CATCTCCTTTGGTTCTCGGATTCC 393980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40114887283044