Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mustela_20putorius_20furo_20[refseq_20GCF_5F000215625.1_202011-06- 02] 7,783 sequences; 2,410,879,678 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq179 264 9e-67 >seq179 Length=4360684 Score = 264 bits (292), Expect = 9e-67 Identities = 157/164 (96%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 394307 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 394248 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 394247 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 394188 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 |||||| ||||| |||||||||||||| |||||||| ||||||| Sbjct 394187 CACCTATTTTGCACTGATGGATGGAAAAGTGTATGACATCACAG 394144 Score = 136 bits (150), Expect = 3e-28 Identities = 86/93 (92%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 394063 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCACAGAGTCCCCTATCA 394004 Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||| | |||||||| ||||| ||||| ||||| Sbjct 394003 CATCTCCTTTGGTTCTCGGATTCCAGGCACCAG 393971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40207679157592