Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20davidii_20[refseq_20GCF_5F000327345.1_202012-12-20] 101,769 sequences; 2,059,799,708 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq11838 114 7e-23 seq19122 82.4 4e-13 >seq11838 Length=10179742 Score = 114 bits (126), Expect = 7e-23 Identities = 83/91 (91%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 9142212 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 9142153 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 9142152 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 9142126 >seq19122 Length=5646833 Score = 82.4 bits (90), Expect = 4e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 || ||||||||||| ||||||||||| |||||||| | | || |||| |||||||||||| Sbjct 50918 CTTCCCAGGCATAGCTCACCATCTTTTGGGTCCTAGCACGTGTGCTCATGCTCCACCTCC 50977 Query 897 CCGACGCGGTCGG 909 ||| ||||| || Sbjct 50978 CCGGTGCGGTGGG 50990 Score = 82.4 bits (90), Expect = 4e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 || ||||||||||| ||||||||||| |||||||| | | || |||| |||||||||||| Sbjct 51663 CTTCCCAGGCATAGCTCACCATCTTTTGGGTCCTAGCACGTGTGCTCATGCTCCACCTCC 51722 Query 897 CCGACGCGGTCGG 909 ||| ||||| || Sbjct 51723 CCGGTGCGGTGGG 51735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2857797610962