Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq120 268 7e-68 >seq120 Length=3863894 Score = 268 bits (296), Expect = 7e-68 Identities = 157/163 (96%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3631495 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 3631554 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct 3631555 CTGCATCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGTATGTTGGGCCTCAAGATC 3631614 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 3631615 ACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 3631657 Score = 125 bits (138), Expect = 6e-25 Identities = 97/114 (85%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225 |||||||||||||||| ||||| || ||||||||||||||||| || |||||||| |||| Sbjct 3631733 CAGAGTGGGCTGGATGTCAGCGAGTAGGAATCTCCCCAGATACTCATAGAGTCCCCTATC 3631792 Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTG 5279 ||||| |||||||||| ||||| ||||| ||||| | | || ||||| | ||| Sbjct 3631793 ACATCTCATTTGGTTCTCGGATACCAGGCACCAGTGGGC-GACAGAGGTAGGTG 3631845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40205928010096