Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq878 114 7e-23 seq1193 100 2e-18 seq934 100 2e-18 seq10828 95.1 7e-17 seq1004 95.1 7e-17 seq2331 89.7 3e-15 seq633 89.7 3e-15 seq1117 87.8 1e-14 seq9463 86.0 4e-14 seq1469 82.4 4e-13 seq406 75.2 6e-11 >seq878 Length=194879 Score = 114 bits (126), Expect = 7e-23 Identities = 83/91 (91%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 72091 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCTTGCTCCACCTCC 72150 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 72151 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 72177 >seq1193 Length=87947 Score = 100 bits (110), Expect = 2e-18 Identities = 60/63 (95%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 68437 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 68496 Query 897 CCG 899 ||| Sbjct 68497 CCG 68499 >seq934 Length=296671 Score = 100 bits (110), Expect = 2e-18 Identities = 60/63 (95%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 80817 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 80876 Query 897 CCG 899 ||| Sbjct 80877 CCG 80879 >seq10828 Length=5524 Score = 95.1 bits (104), Expect = 7e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 838 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCC 897 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 1078 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACATGTGCGCTCATGCTCCACCTCCC 1019 Query 898 CG 899 || Sbjct 1018 CG 1017 >seq1004 Length=117205 Score = 95.1 bits (104), Expect = 7e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 838 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCC 897 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 82344 TGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACATGTGCGCTCATGCTCCACCTCCC 82403 Query 898 CG 899 || Sbjct 82404 CG 82405 >seq2331 Length=25307 Score = 89.7 bits (98), Expect = 3e-15 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||| ||||||||| |||||||||| |||| |||| |||||||||||| Sbjct 15153 CTGCCCAGGCATAGTTTACCATCTTTTGGGTCCTAACACATGTGCTCATGCTCCACCTCC 15094 Query 897 CC 898 || Sbjct 15093 CC 15092 >seq633 Length=404416 Score = 89.7 bits (98), Expect = 3e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTC 895 |||||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||| Sbjct 83663 CTGCCCAGGCATAGTTTACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTC 83721 >seq1117 Length=218703 Score = 87.8 bits (96), Expect = 1e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||| |||||| Sbjct 26543 CTGCCCAGGCATAGTTTACCATCTTTTGGGTCCTAACACATGCGCTCATGCTCTACCTCC 26484 Query 897 C 897 | Sbjct 26483 C 26483 Score = 77.0 bits (84), Expect = 2e-11 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||| || ||||||||||||||||| ||||||| ||||| |||||| Sbjct 3563 CTGCCCAGGCATAGTTGACTATCTTTCGGGTCCTAACATGTGCGCTCATGCTCAACCTCC 3504 >seq9463 Length=6309 Score = 86.0 bits (94), Expect = 4e-14 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||| Sbjct 924 CTGCCCAGGCATAGAATACCATCTTTTGGGTCCTAACACATGCGCTCATGCTCCACCTCC 983 Query 897 CC 898 || Sbjct 984 CC 985 >seq1469 Length=59494 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | || || |||||||||||| Sbjct 15406 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTG-AATCATGCTCCACCTCC 15464 Query 897 CC 898 || Sbjct 15465 CC 15466 >seq406 Length=977923 Score = 75.2 bits (82), Expect = 6e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||| || ||||||||| || |||| ||||||| |||| Sbjct 820232 CTGCCCAGGCATAGTTCACCATCTCTCTGGTCCTAACAAGTGGGCTCATGCTCCAGCTCC 820291 Query 897 C 897 | Sbjct 820292 C 820292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860456183692