Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq158 342 4e-90
seq147 264 9e-67
>seq158
Length=7371824
Score = 342 bits (378), Expect = 4e-90
Identities = 240/277 (87%), Gaps = 19/277 (7%)
Strand=Plus/Minus
Query 4996 GTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGC 5055
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3536156 GTGCAGCCGGTGCCAGGGCAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGC 3536097
Query 5056 CAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGA 5115
||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct 3536096 CAGATACTGCGCTGAGTGTAATAGACTGCATCCTGCTGAGGAAGGAGACTTCTGGGCAGA 3536037
Query 5116 GTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGA 5175
||| ||||||||||||||||| |||||||| | ||| ||||||||||||||||
Sbjct 3536036 GTCAAGCATGTTGGGCCTCAAGATCACCTATTCTGCACTGATGGATGGAAAGG------- 3535984
Query 5176 TATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCC---------- 5225
|||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3535983 --TCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCCCAGATACCT 3535926
Query 5226 ACAGAGTCCCTTGTCACATCTCATTTGGTTCACGGAT 5262
||||||||| | |||||||||||| ||||| ||||
Sbjct 3535925 CCAGAGTCCCCTATCACATCTCATTCGGTTCTTGGAT 3535889
>seq147
Length=2793004
Score = 264 bits (292), Expect = 9e-67
Identities = 157/164 (96%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5020 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 365364 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAAGAG 365305
Query 5080 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAAT 5139
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct 365304 GCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 365245
Query 5140 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
|||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 365244 CACCTATTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 365201
Score = 134 bits (148), Expect = 1e-27
Identities = 80/84 (95%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 365120 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATCA 365061
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
||||||||||||||| ||||| ||
Sbjct 365060 CATCTCATTTGGTTCTCGGATTCC 365037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40116642964524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |