Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq158 370 8e-99
seq147 269 2e-68
>seq158
Length=7371824
Score = 370 bits (410), Expect = 8e-99
Identities = 267/311 (86%), Gaps = 19/311 (6%)
Strand=Plus/Minus
Query 4959 AAGACTCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAA 5018
|||| |||||||||| |||| ||||| ||| |||||||| |||||||||||||||||||
Sbjct 3536178 AAGAGGCAATGAATACTATGACGTGCAGCCGGTGCCAGGGCAAGCATAGGAGGTTTGAAA 3536119
Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 3536118 TGGACCGGGAACCTAAGAGTGCCAGATACTGCGCTGAGTGTAATAGACTGCATCCTGCTG 3536059
Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138
||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | ||| |
Sbjct 3536058 AGGAAGGAGACTTCTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATCACCTATTCTGCAC 3535999
Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198
||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 3535998 TGATGGATGGAAAGG---------TCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCT 3535948
Query 5199 CCCCAGATACCC----------ACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATG 5248
|||||||||||| ||||||||| ||||||||| |||| ||||| ||||
Sbjct 3535947 CCCCAGATACCCCCAGATACCTCCAGAGTCCCCTATCACATCTCATTCGGTTCTTGGATT 3535888
Query 5249 CCAGGTACCAG 5259
|||| |||||
Sbjct 3535887 GCAGGCACCAG 3535877
>seq147
Length=2793004
Score = 269 bits (298), Expect = 2e-68
Identities = 158/164 (96%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 365364 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAAGAG 365305
Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 365304 GCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 365245
Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
|||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 365244 CACCTATTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 365201
Score = 145 bits (160), Expect = 6e-31
Identities = 88/93 (95%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 365120 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATCA 365061
Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
|||| |||||||||| ||||| ||||| |||||
Sbjct 365060 CATCTCATTTGGTTCTCGGATTCCAGGCACCAG 365028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40209438900232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |