Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq158 370 8e-99 seq147 269 2e-68 >seq158 Length=7371824 Score = 370 bits (410), Expect = 8e-99 Identities = 267/311 (86%), Gaps = 19/311 (6%) Strand=Plus/Minus Query 4959 AAGACTCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAA 5018 |||| |||||||||| |||| ||||| ||| |||||||| ||||||||||||||||||| Sbjct 3536178 AAGAGGCAATGAATACTATGACGTGCAGCCGGTGCCAGGGCAAGCATAGGAGGTTTGAAA 3536119 Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 3536118 TGGACCGGGAACCTAAGAGTGCCAGATACTGCGCTGAGTGTAATAGACTGCATCCTGCTG 3536059 Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138 ||||||| ||||| ||||||||||||||||||||||||||||| |||||||| | ||| | Sbjct 3536058 AGGAAGGAGACTTCTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATCACCTATTCTGCAC 3535999 Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198 ||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 3535998 TGATGGATGGAAAGG---------TCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCT 3535948 Query 5199 CCCCAGATACCC----------ACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATG 5248 |||||||||||| ||||||||| ||||||||| |||| ||||| |||| Sbjct 3535947 CCCCAGATACCCCCAGATACCTCCAGAGTCCCCTATCACATCTCATTCGGTTCTTGGATT 3535888 Query 5249 CCAGGTACCAG 5259 |||| ||||| Sbjct 3535887 GCAGGCACCAG 3535877 >seq147 Length=2793004 Score = 269 bits (298), Expect = 2e-68 Identities = 158/164 (96%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 365364 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAAGAG 365305 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 365304 GCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 365245 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 |||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct 365244 CACCTATTTTGCACTGATGGATGGAAAGGTGTATGACATCACAG 365201 Score = 145 bits (160), Expect = 6e-31 Identities = 88/93 (95%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 365120 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATCA 365061 Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 |||| |||||||||| ||||| ||||| ||||| Sbjct 365060 CATCTCATTTGGTTCTCGGATTCCAGGCACCAG 365028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40209438900232