Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq9166 268 7e-68
>seq9166
Length=194375
Score = 268 bits (296), Expect = 7e-68
Identities = 157/163 (96%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165740 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 165681
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 165680 CTGCACCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 165621
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||| |||||||||| || ||||||||||||||||
Sbjct 165620 ACCTACTTTGCAATGATGGATGGGAAAGTGTATGATATCACAG 165578
Score = 136 bits (150), Expect = 3e-28
Identities = 81/85 (95%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 165498 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGGGTCCCTTATC 165439
Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265
||||||||||||| || ||||||||
Sbjct 165438 ACATCTCATTTGGCTCGCGGATGCC 165414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40110715621368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |