Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202 017-04-20] 17,026 sequences; 2,380,505,687 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq12372 114 7e-23 seq503 114 7e-23 >seq12372 Length=1948381 Score = 114 bits (126), Expect = 7e-23 Identities = 83/91 (91%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 1218910 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 1218969 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 1218970 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 1218996 >seq503 Length=635014 Score = 114 bits (126), Expect = 7e-23 Identities = 83/91 (91%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||| Sbjct 517990 CTGCCCAGGCATAGTTCACCATCTTTCCGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 517931 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 517930 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 517904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860297698948