Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odocoileus_20virginianus_20texanus_20[refseq_20GCF_5F002102435.1_202
017-04-20] 17,026 sequences; 2,380,505,687 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq12372 114 7e-23
seq503 114 7e-23
>seq12372
Length=1948381
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 1218910 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 1218969
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 1218970 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 1218996
>seq503
Length=635014
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||
Sbjct 517990 CTGCCCAGGCATAGTTCACCATCTTTCCGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 517931
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 517930 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 517904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2860297698948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |