Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq576 264 9e-67
>seq576
Length=4756302
Score = 264 bits (292), Expect = 9e-67
Identities = 157/164 (96%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3488190 TAGGAGGTTTGAAATGGACCGGGAACCTAAAAGTGCCAGATACTGTGCTGAGTGTAATAG 3488131
Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 3488130 ACTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGAT 3488071
Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
|||||| |||||||| |||||||||||||||||||| |||||||
Sbjct 3488070 CACCTATTTTGCGCTAATGGATGGAAAGGTGTATGACATCACAG 3488027
Score = 138 bits (152), Expect = 9e-29
Identities = 87/94 (93%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225
||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct 3487947 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCATAGAGTCCCCTATC 3487888
Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
||||| |||||||||| ||||| ||||| |||||
Sbjct 3487887 ACATCTCATTTGGTTCTCGGATTCCAGGCACCAG 3487854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40210530935896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |