Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq4679 244 8e-61 >seq4679 Length=11430 Score = 244 bits (270), Expect = 8e-61 Identities = 152/163 (93%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5488 AGAAGGTTTGAAATAGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 5429 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 | ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct 5428 CGACATCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 5369 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 5368 ACCTACTTTGCGCTGATGGATGGGAAGGTGTATGACATCACAG 5326 Score = 129 bits (142), Expect = 5e-26 Identities = 79/84 (94%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| Sbjct 5246 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCACAGAGTCCCCTATCA 5187 Query 5242 CATCTCATTTGGTTCACGGATGCC 5265 ||||||||||||||| ||||| || Sbjct 5186 CATCTCATTTGGTTCTCGGATCCC 5163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40038333251868