Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq4679 244 8e-61
>seq4679
Length=11430
Score = 244 bits (270), Expect = 8e-61
Identities = 152/163 (93%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5488 AGAAGGTTTGAAATAGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 5429
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 5428 CGACATCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 5369
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 5368 ACCTACTTTGCGCTGATGGATGGGAAGGTGTATGACATCACAG 5326
Score = 129 bits (142), Expect = 5e-26
Identities = 79/84 (94%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 5182 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCA 5241
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct 5246 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCACAGAGTCCCCTATCA 5187
Query 5242 CATCTCATTTGGTTCACGGATGCC 5265
||||||||||||||| ||||| ||
Sbjct 5186 CATCTCATTTGGTTCTCGGATCCC 5163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40038333251868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |