Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq4679 250 2e-62 >seq4679 Length=11430 Score = 250 bits (276), Expect = 2e-62 Identities = 153/163 (94%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 5488 AGAAGGTTTGAAATAGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 5429 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 | ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 5428 CGACATCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 5369 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 5368 ACCTACTTTGCGCTGATGGATGGGAAGGTGTATGACATCACAG 5326 Score = 141 bits (156), Expect = 7e-30 Identities = 100/113 (88%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 5246 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACTCACAGAGTCCCCTATCA 5187 Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTG 5279 |||| |||||||||| ||||| ||||| ||||| | | || ||||| | ||| Sbjct 5186 CATCTCATTTGGTTCTCGGATCCCAGGCACCAGTGGAC-GACAGAGGTAGGTG 5135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40130948045224