Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq2019 259 4e-65
>seq2019
Length=1203175
Score = 259 bits (286), Expect = 4e-65
Identities = 155/163 (95%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 802893 AGGAGGTTTGAAATGGACCGAGAGCCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 802952
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
||||| |||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 802953 CTGCACCCTGCTGAAGAAGGAGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAGATC 803012
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
||||||||||||||||||||||||||||||||||| |||||||
Sbjct 803013 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 803055
Score = 147 bits (162), Expect = 2e-31
Identities = 101/113 (89%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 5167 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCA 5226
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 803135 AGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATCA 803194
Query 5227 CATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTG 5279
|||| |||||||||| ||||| ||||| ||||| | | || ||||| | |||
Sbjct 803195 CATCTCATTTGGTTCTCGGATCCCAGGCACCAGTGGGC-GACAGAGGTAGGTG 803246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40210073583760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |