Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_018464.1
Length=927
Score E
Sequences producing significant alignments: (Bits) Value
seq1909 114 7e-23
seq1809 114 7e-23
seq1420 114 7e-23
seq1356 114 7e-23
seq1270 114 7e-23
seq1107 114 7e-23
seq1084 114 7e-23
seq956 114 7e-23
seq947 114 7e-23
seq861 114 7e-23
seq795 114 7e-23
>seq1909
Length=1426070
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 3433 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 3492
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 3493 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 3519
>seq1809
Length=1688015
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 7781 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 7722
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 7721 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 7695
>seq1420
Length=13757
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 10159 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 10100
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 10099 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 10073
>seq1356
Length=15522
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 8233 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 8174
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 8173 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 8147
>seq1270
Length=18038
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 8823 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 8764
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 8763 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 8737
>seq1107
Length=24261
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 5094 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 5153
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 5154 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 5180
>seq1084
Length=25330
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 13049 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 12990
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 12989 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 12963
>seq956
Length=35261
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 8695 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 8636
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 8635 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 8609
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 33382 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 33323
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 33322 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 33296
>seq947
Length=35897
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 622 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 681
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 682 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 708
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 25407 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 25466
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 25467 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 25493
>seq861
Length=60014
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 14775 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 14716
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 14715 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 14689
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Minus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 39481 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 39422
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 39421 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 39395
>seq795
Length=66781
Score = 114 bits (126), Expect = 7e-23
Identities = 83/91 (91%), Gaps = 4/91 (4%)
Strand=Plus/Plus
Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896
||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||
Sbjct 8907 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 8966
Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927
||| ||||| |||| || || ||||||||||
Sbjct 8967 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 8993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2860726540020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |