Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq78 109 3e-21 seq123 100 2e-18 seq2 96.9 2e-17 seq22 91.5 8e-16 seq91 89.7 3e-15 seq74 89.7 3e-15 seq58 89.7 3e-15 seq3 89.7 3e-15 seq1 89.7 3e-15 seq28 87.8 1e-14 seq83 86.0 4e-14 seq325 84.2 1e-13 seq146 84.2 1e-13 seq69 82.4 4e-13 seq77 80.6 2e-12 seq63 80.6 2e-12 seq72 78.8 5e-12 seq140 77.0 2e-11 >seq78 Length=9970888 Score = 109 bits (120), Expect = 3e-21 Identities = 82/91 (90%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 8605 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 8546 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| |||| |||| || || || ||||||| Sbjct 8545 CCGGTGCGG-CGGG-CG-AG-ACAGGCCGGT 8519 >seq123 Length=4534867 Score = 100 bits (110), Expect = 2e-18 Identities = 80/91 (88%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct 3058488 CTGCCCAGGCACAGTTCACCATCTTTGGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 3058547 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||| | |||| || || | |||||||| Sbjct 3058548 CCGGCGCAG-CGGG-CG-AG-AAGGGCCGGT 3058574 >seq2 Length=55267054 Score = 96.9 bits (106), Expect = 2e-17 Identities = 59/63 (94%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 48454202 CTGCCCAGGTGTAGTTCACCATCTTTCGGGTCCTAACGTGTGCGCTCGTGCTCCACCTCC 48454143 Query 897 CCG 899 ||| Sbjct 48454142 CCG 48454140 >seq22 Length=28450365 Score = 91.5 bits (100), Expect = 8e-16 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||| ||||||||| | |||| || |||| ||||||| Sbjct 22718424 CTGCCCAGGCATAGTTCACCATCTTTCAGGTCCTAACACGTGCGATCATGCTTCACCTCC 22718365 Query 897 CCGACGCGGTCGG 909 | | |||||| || Sbjct 22718364 CAGGCGCGGTGGG 22718352 >seq91 Length=7867590 Score = 89.7 bits (98), Expect = 3e-15 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||| ||||||||| ||||| |||||| | ||||||| |||||||||||| Sbjct 180803 CTGCCCAGGCATAGCTCACCATCTCTCGGGCCCTAACACGTGCGCTCATGCTCCACCTCC 180744 Query 897 CCGACGCGG 905 ||| || || Sbjct 180743 CCGGCGTGG 180735 >seq74 Length=10338425 Score = 89.7 bits (98), Expect = 3e-15 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 36668 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACATGAGCACTCGTGCTCCACCTCC 36609 Query 897 CCGACGCGG 905 | | || || Sbjct 36608 CTGGCGTGG 36600 >seq58 Length=13141688 Score = 89.7 bits (98), Expect = 3e-15 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||| ||| Sbjct 425563 CTGCCCAGGCGTAGTTCACCATCTTTCGGGTCCTAACACATGTGCTTGTGCTCCACTTCC 425622 Query 897 CC 898 || Sbjct 425623 CC 425624 >seq3 Length=52403620 Score = 89.7 bits (98), Expect = 3e-15 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct 40246920 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTAACATGTGTGCTCGTGCTCCACCTCC 40246861 Query 897 CCGACGCGGTCGGG 910 | ||||| |||| Sbjct 40246860 CTAGCGCGG-CGGG 40246848 >seq1 Length=60238417 Score = 89.7 bits (98), Expect = 3e-15 Identities = 57/61 (93%), Gaps = 1/61 (2%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||||| | |||| ||||||||||||||| Sbjct 58718407 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTAACAC-TGCGTTCGTGCTCCACCTCC 58718349 Query 897 C 897 | Sbjct 58718348 C 58718348 Score = 80.6 bits (88), Expect = 2e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||| ||||||||||| |||||||||| ||| ||| |||||||||||| Sbjct 38335916 CTGCCCAGGCATAGCTCACCATCTTTTGGGTCCTAACATGTGCACTCATGCTCCACCTCC 38335975 Query 897 CC 898 || Sbjct 38335976 CC 38335977 >seq28 Length=26224161 Score = 87.8 bits (96), Expect = 1e-14 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 || |||||||||||||||||||||||| ||| ||||| | ||||||| |||||||||||| Sbjct 23525295 CTACCCAGGCATAGTTCACCATCTTTCAGGTACTAACACGTGCGCTCATGCTCCACCTCC 23525354 Query 897 CCG 899 ||| Sbjct 23525355 CCG 23525357 >seq83 Length=8991396 Score = 86.0 bits (94), Expect = 4e-14 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||||| | |||||| ||||| |||||| Sbjct 3453978 CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTAACACGAGCGCTCATGCTCTACCTCC 3453919 Query 897 CC 898 || Sbjct 3453918 CC 3453917 Score = 82.4 bits (90), Expect = 4e-13 Identities = 57/64 (89%), Gaps = 3/64 (5%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATC---TTTCGGGTCCTAACGCATGCGCTCGTGCTCCACC 893 |||||||||||||||||| |||| ||| |||||||||| |||| |||||||||||||| Sbjct 1911391 CTGCCCAGGCATAGTTCATCATCATCTTTTGGGTCCTAACACATGTGCTCGTGCTCCACC 1911450 Query 894 TCCC 897 |||| Sbjct 1911451 TCCC 1911454 >seq325 Length=116977 Score = 84.2 bits (92), Expect = 1e-13 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||| |||||||||| ||||||||||||||||| | ||||||| |||| ||||||| Sbjct 60714 CTGCCCAGACATAGTTCACTATCTTTCGGGTCCTAACACGTGCGCTCATGCTTCACCTCC 60655 Query 897 C 897 | Sbjct 60654 C 60654 >seq146 Length=3583196 Score = 84.2 bits (92), Expect = 1e-13 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||| |||||||||| ||||||||||||||||| | ||||||| |||| ||||||| Sbjct 226380 CTGCCCAGACATAGTTCACTATCTTTCGGGTCCTAACACGTGCGCTCATGCTTCACCTCC 226321 Query 897 C 897 | Sbjct 226320 C 226320 Score = 78.8 bits (86), Expect = 5e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||| |||||| ||||||||| | |||||| ||||| ||||||| Sbjct 207984 CTGCCCAGGCATAGTTCACTGTCTTTCAGGTCCTAACACTTGCGCTTGTGCTTCACCTCC 207925 Query 897 C 897 | Sbjct 207924 C 207924 >seq69 Length=11345371 Score = 82.4 bits (90), Expect = 4e-13 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||| ||||||||| ||| ||| || |||||||| | Sbjct 3065874 CTGCCCAGGCATAGTTCACCATCTTTCAGGTCCTAACACATATGCTTGTACTCCACCTTC 3065933 Query 897 CCGACGCGGTCGG 909 || | |||| || Sbjct 3065934 CCAGCACGGTGGG 3065946 >seq77 Length=10001809 Score = 80.6 bits (88), Expect = 2e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 837 CTGCCCAGGCA--TAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCT 894 |||||||||| ||||||||||||||||| |||||||| | ||||||||||||||| || Sbjct 6501046 CTGCCCAGGCGCGTAGTTCACCATCTTTCGTGTCCTAACACGTGCGCTCGTGCTCCATCT 6501105 Query 895 CCC 897 ||| Sbjct 6501106 CCC 6501108 >seq63 Length=12490058 Score = 80.6 bits (88), Expect = 2e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||| ||||||||||||||| ||||||||| | | |||||||||||||||||| Sbjct 5075728 CTGCCCAGGTGCAGTTCACCATCTTTCAGGTCCTAACACTTCCGCTCGTGCTCCACCTCC 5075669 Query 897 CC 898 || Sbjct 5075668 CC 5075667 >seq72 Length=10326545 Score = 78.8 bits (86), Expect = 5e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||| Sbjct 9099156 CTGCCCAGGCATAGTTCACCATCTTTCAGGTCCTAACATGTGCATTCCTGCTCCACCTCC 9099215 Query 897 C 897 | Sbjct 9099216 C 9099216 >seq140 Length=3876641 Score = 77.0 bits (84), Expect = 2e-11 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACC 893 |||||||||| ||| |||||||||||| ||||||||| | |||||| |||||||||| Sbjct 2103215 CTGCCCAGGCTTAGCTCACCATCTTTCAGGTCCTAACACGTGCGCTGGTGCTCCACC 2103159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860421046810