Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq61971 387 1e-103
seq10113 356 2e-94
seq243 268 7e-68
seq12905 232 5e-57
>seq61971
Length=22510
Score = 387 bits (428), Expect = 1e-103
Identities = 249/271 (92%), Gaps = 1/271 (0%)
Strand=Plus/Minus
Query 4995 TGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTG 5054
|||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||| |
Sbjct 7724 TGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGCAACGGACCAGGAACCTGAGAGCG 7665
Query 5055 CCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAG 5114
||||| |||| ||||||||||| |||||||||||||||||||||| |||||| ||||||
Sbjct 7664 CCAGACACTGCGCTGAGTGTAACGGGCTGCATCCTGCTGAGGAAGGAGACTTTGGGGCAG 7605
Query 5115 AGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATG 5174
||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 7604 AGTCGAGCATGATGGGCCTCAAGATCACCTACTTTGCGCTGATGGATAGAAAGGTGTATG 7545
Query 5175 ATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCC 5234
| ||||||||||||||||||||||||| ||||||||||||||||||||||| | | ||||
Sbjct 7544 ACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCGCCGGGTCC 7485
Query 5235 CTTGTCACATCTCATTTGGTTCACGGATGCC 5265
| |||||||||||||||||||||||||||
Sbjct 7484 C-CATCACATCTCATTTGGTTCACGGATGCC 7455
>seq10113
Length=88146
Score = 356 bits (394), Expect = 2e-94
Identities = 242/272 (89%), Gaps = 11/272 (4%)
Strand=Plus/Plus
Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053
||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||| ||||
Sbjct 15868 ATGTGCAGCCGTTGCCAGGGAGAGCATAGGAG-TTTGAAATGGACCAGGAACCTGAGAGC 15926
Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113
||||||||||||||||| ||||| ||||||||||||||||||||||| | |||| |||||
Sbjct 15927 GCCAGATACTGTGCTGAATGTAACAGGCTGCATCCTGCTGAGGAAGGAGGCTTTGGGGCA 15986
Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173
||||||||||||| |||||||||||||||| |||||||||||| | ||||
Sbjct 15987 ----------TGTTGGGCCTCAAGATCACCTACTTTGCGCCGATGGATGGAAATGCGTAT 16036
Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTC 5233
|| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 16037 GACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCGCAGAGTC 16096
Query 5234 CCTTGTCACATCTCATTTGGTTCACGGATGCC 5265
|| | |||||||||||||||||||||||||||
Sbjct 16097 CCCTATCACATCTCATTTGGTTCACGGATGCC 16128
>seq243
Length=321738
Score = 268 bits (296), Expect = 7e-68
Identities = 157/163 (96%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 38803 AGGAGGTTTGAAATGGATCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 38862
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 38863 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 38922
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
||||||||||||||||||||||||||||||||||| |||||||
Sbjct 38923 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 38965
Score = 145 bits (160), Expect = 6e-31
Identities = 83/85 (98%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 39066 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 39125
Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265
|||||||||||||||||||||||||
Sbjct 39126 ACATCTCATTTGGTTCACGGATGCC 39150
>seq12905
Length=56952
Score = 232 bits (256), Expect = 5e-57
Identities = 136/141 (96%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 5125 GTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGA 5184
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 41795 GTTGGGCCTCAAGATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAGA 41854
Query 5185 GTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCACAT 5244
||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||
Sbjct 41855 GTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCACAGAGTCCCGTATCACAT 41914
Query 5245 CTCATTTGGTTCACGGATGCC 5265
|||||||||||||||||||||
Sbjct 41915 CTCATTTGGTTCACGGATGCC 41935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40009828928076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |