Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq61971 387 1e-103 seq10113 356 2e-94 seq243 268 7e-68 seq12905 232 5e-57 >seq61971 Length=22510 Score = 387 bits (428), Expect = 1e-103 Identities = 249/271 (92%), Gaps = 1/271 (0%) Strand=Plus/Minus Query 4995 TGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTG 5054 |||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||| | Sbjct 7724 TGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGCAACGGACCAGGAACCTGAGAGCG 7665 Query 5055 CCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAG 5114 ||||| |||| ||||||||||| |||||||||||||||||||||| |||||| |||||| Sbjct 7664 CCAGACACTGCGCTGAGTGTAACGGGCTGCATCCTGCTGAGGAAGGAGACTTTGGGGCAG 7605 Query 5115 AGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATG 5174 ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 7604 AGTCGAGCATGATGGGCCTCAAGATCACCTACTTTGCGCTGATGGATAGAAAGGTGTATG 7545 Query 5175 ATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCC 5234 | ||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||| Sbjct 7544 ACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCGCCGGGTCC 7485 Query 5235 CTTGTCACATCTCATTTGGTTCACGGATGCC 5265 | ||||||||||||||||||||||||||| Sbjct 7484 C-CATCACATCTCATTTGGTTCACGGATGCC 7455 >seq10113 Length=88146 Score = 356 bits (394), Expect = 2e-94 Identities = 242/272 (89%), Gaps = 11/272 (4%) Strand=Plus/Plus Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053 ||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||| |||| Sbjct 15868 ATGTGCAGCCGTTGCCAGGGAGAGCATAGGAG-TTTGAAATGGACCAGGAACCTGAGAGC 15926 Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113 ||||||||||||||||| ||||| ||||||||||||||||||||||| | |||| ||||| Sbjct 15927 GCCAGATACTGTGCTGAATGTAACAGGCTGCATCCTGCTGAGGAAGGAGGCTTTGGGGCA 15986 Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173 ||||||||||||| |||||||||||||||| |||||||||||| | |||| Sbjct 15987 ----------TGTTGGGCCTCAAGATCACCTACTTTGCGCCGATGGATGGAAATGCGTAT 16036 Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTC 5233 || ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 16037 GACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCGCAGAGTC 16096 Query 5234 CCTTGTCACATCTCATTTGGTTCACGGATGCC 5265 || | ||||||||||||||||||||||||||| Sbjct 16097 CCCTATCACATCTCATTTGGTTCACGGATGCC 16128 >seq243 Length=321738 Score = 268 bits (296), Expect = 7e-68 Identities = 157/163 (96%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 38803 AGGAGGTTTGAAATGGATCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 38862 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| Sbjct 38863 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 38922 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 38923 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 38965 Score = 145 bits (160), Expect = 6e-31 Identities = 83/85 (98%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 39066 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 39125 Query 5241 ACATCTCATTTGGTTCACGGATGCC 5265 ||||||||||||||||||||||||| Sbjct 39126 ACATCTCATTTGGTTCACGGATGCC 39150 >seq12905 Length=56952 Score = 232 bits (256), Expect = 5e-57 Identities = 136/141 (96%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 5125 GTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGA 5184 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 41795 GTTGGGCCTCAAGATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAGA 41854 Query 5185 GTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTCACAT 5244 ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||| Sbjct 41855 GTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCACAGAGTCCCGTATCACAT 41914 Query 5245 CTCATTTGGTTCACGGATGCC 5265 ||||||||||||||||||||| Sbjct 41915 CTCATTTGGTTCACGGATGCC 41935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40009828928076