Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq61971 405 4e-109 seq10113 387 1e-103 seq243 271 6e-69 seq12905 251 6e-63 >seq61971 Length=22510 Score = 405 bits (448), Expect = 4e-109 Identities = 271/301 (90%), Gaps = 1/301 (0%) Strand=Plus/Minus Query 4959 AAGACTCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAA 5018 |||| |||||||||| || |||||| ||||||||||||||||||||||||||||| || Sbjct 7745 AAGAAGCAATGAATACTGTGGTGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGCAA 7686 Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078 ||||| ||||||| |||| |||||| |||| ||||||||||| ||||||||||||||| Sbjct 7685 CGGACCAGGAACCTGAGAGCGCCAGACACTGCGCTGAGTGTAACGGGCTGCATCCTGCTG 7626 Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138 ||||||| |||||| |||||||||| |||||| |||||||||| |||||||||||||||| Sbjct 7625 AGGAAGGAGACTTTGGGGCAGAGTCGAGCATGATGGGCCTCAAGATCACCTACTTTGCGC 7566 Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198 |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct 7565 TGATGGATAGAAAGGTGTATGACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCT 7506 Query 5199 CCCCAGATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCA 5258 |||||||||||| | | ||||| |||||||| |||||||||||||||||||||| |||| Sbjct 7505 CCCCAGATACCCGCCGGGTCCC-CATCACATCTCATTTGGTTCACGGATGCCAGGCACCA 7447 Query 5259 G 5259 | Sbjct 7446 G 7446 >seq10113 Length=88146 Score = 387 bits (428), Expect = 1e-103 Identities = 266/301 (88%), Gaps = 11/301 (4%) Strand=Plus/Plus Query 4959 AAGACTCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAA 5018 |||| |||||||||| |||||||||| ||| ||||||||| |||||||||| ||||||| Sbjct 15848 AAGAAGCAATGAATACTATGATGTGCAGCCGTTGCCAGGGAGAGCATAGGAG-TTTGAAA 15906 Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078 |||||| ||||||| |||| ||||||||||||||||| ||||| |||||||||||||||| Sbjct 15907 TGGACCAGGAACCTGAGAGCGCCAGATACTGTGCTGAATGTAACAGGCTGCATCCTGCTG 15966 Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138 ||||||| | |||| ||||| ||||||||||||| |||||||||||||||| Sbjct 15967 AGGAAGGAGGCTTTGGGGCA----------TGTTGGGCCTCAAGATCACCTACTTTGCGC 16016 Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198 |||||||||||| | |||||| ||||||||||||||||||||||||| ||||||||||| Sbjct 16017 CGATGGATGGAAATGCGTATGACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCT 16076 Query 5199 CCCCAGATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCA 5258 |||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||| Sbjct 16077 CCCCAGATACCCGCAGAGTCCCCTATCACATCTCATTTGGTTCACGGATGCCAGGCACCA 16136 Query 5259 G 5259 | Sbjct 16137 G 16137 >seq243 Length=321738 Score = 271 bits (300), Expect = 6e-69 Identities = 158/163 (97%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 38803 AGGAGGTTTGAAATGGATCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 38862 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 38863 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 38922 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 38923 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 38965 Score = 156 bits (172), Expect = 3e-34 Identities = 91/94 (97%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 39066 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 39125 Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259 ||||| |||||||||||||||||||||| ||||| Sbjct 39126 ACATCTCATTTGGTTCACGGATGCCAGGCACCAG 39159 >seq12905 Length=56952 Score = 251 bits (278), Expect = 6e-63 Identities = 155/164 (95%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 5110 GTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGA 5169 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 41795 GTTGGGCCTCAAGATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAGA 41854 Query 5170 GTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCACAT 5229 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 41855 GTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCACAGAGTCCCGTATCACAT 41914 Query 5230 CCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAG-AGAGAG 5272 | |||||||||||||||||||||| ||||| || ||| |||||| Sbjct 41915 CTCATTTGGTTCACGGATGCCAGGCACCAGTGAGCAGCAGAGAG 41958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40102377786568