Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq61971 405 4e-109
seq10113 387 1e-103
seq243 271 6e-69
seq12905 251 6e-63
>seq61971
Length=22510
Score = 405 bits (448), Expect = 4e-109
Identities = 271/301 (90%), Gaps = 1/301 (0%)
Strand=Plus/Minus
Query 4959 AAGACTCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAA 5018
|||| |||||||||| || |||||| ||||||||||||||||||||||||||||| ||
Sbjct 7745 AAGAAGCAATGAATACTGTGGTGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGCAA 7686
Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078
||||| ||||||| |||| |||||| |||| ||||||||||| |||||||||||||||
Sbjct 7685 CGGACCAGGAACCTGAGAGCGCCAGACACTGCGCTGAGTGTAACGGGCTGCATCCTGCTG 7626
Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138
||||||| |||||| |||||||||| |||||| |||||||||| ||||||||||||||||
Sbjct 7625 AGGAAGGAGACTTTGGGGCAGAGTCGAGCATGATGGGCCTCAAGATCACCTACTTTGCGC 7566
Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198
|||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 7565 TGATGGATAGAAAGGTGTATGACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCT 7506
Query 5199 CCCCAGATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCA 5258
|||||||||||| | | ||||| |||||||| |||||||||||||||||||||| ||||
Sbjct 7505 CCCCAGATACCCGCCGGGTCCC-CATCACATCTCATTTGGTTCACGGATGCCAGGCACCA 7447
Query 5259 G 5259
|
Sbjct 7446 G 7446
>seq10113
Length=88146
Score = 387 bits (428), Expect = 1e-103
Identities = 266/301 (88%), Gaps = 11/301 (4%)
Strand=Plus/Plus
Query 4959 AAGACTCAATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAA 5018
|||| |||||||||| |||||||||| ||| ||||||||| |||||||||| |||||||
Sbjct 15848 AAGAAGCAATGAATACTATGATGTGCAGCCGTTGCCAGGGAGAGCATAGGAG-TTTGAAA 15906
Query 5019 TGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTG 5078
|||||| ||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct 15907 TGGACCAGGAACCTGAGAGCGCCAGATACTGTGCTGAATGTAACAGGCTGCATCCTGCTG 15966
Query 5079 AGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGC 5138
||||||| | |||| ||||| ||||||||||||| ||||||||||||||||
Sbjct 15967 AGGAAGGAGGCTTTGGGGCA----------TGTTGGGCCTCAAGATCACCTACTTTGCGC 16016
Query 5139 TGATGGATGGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCT 5198
|||||||||||| | |||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 16017 CGATGGATGGAAATGCGTATGACATCACAGAGTGGGCTGGATGCCAGCATGTGGGAATCT 16076
Query 5199 CCCCAGATACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGTACCA 5258
|||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| ||||
Sbjct 16077 CCCCAGATACCCGCAGAGTCCCCTATCACATCTCATTTGGTTCACGGATGCCAGGCACCA 16136
Query 5259 G 5259
|
Sbjct 16137 G 16137
>seq243
Length=321738
Score = 271 bits (300), Expect = 6e-69
Identities = 158/163 (97%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 38803 AGGAGGTTTGAAATGGATCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGA 38862
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 38863 CTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 38922
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168
||||||||||||||||||||||||||||||||||| |||||||
Sbjct 38923 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAG 38965
Score = 156 bits (172), Expect = 3e-34
Identities = 91/94 (97%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 39066 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCCTATC 39125
Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAG 5259
||||| |||||||||||||||||||||| |||||
Sbjct 39126 ACATCTCATTTGGTTCACGGATGCCAGGCACCAG 39159
>seq12905
Length=56952
Score = 251 bits (278), Expect = 6e-63
Identities = 155/164 (95%), Gaps = 1/164 (1%)
Strand=Plus/Plus
Query 5110 GTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGA 5169
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 41795 GTTGGGCCTCAAGATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGACATCACAGA 41854
Query 5170 GTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCACAT 5229
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 41855 GTGGGCTGGATGCCAGCATGTGGGAATCTCCCCAGATACCCACAGAGTCCCGTATCACAT 41914
Query 5230 CCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAG-AGAGAG 5272
| |||||||||||||||||||||| ||||| || ||| ||||||
Sbjct 41915 CTCATTTGGTTCACGGATGCCAGGCACCAGTGAGCAGCAGAGAG 41958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40102377786568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |