Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq125 114 7e-23 seq19044 89.7 3e-15 >seq125 Length=3337254 Score = 114 bits (126), Expect = 7e-23 Identities = 83/91 (91%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||| Sbjct 19188 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCATGCTCCACCTCC 19247 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 19248 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 19274 >seq19044 Length=2450392 Score = 89.7 bits (98), Expect = 3e-15 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 841 CCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCCGA 900 |||||||||||||| |||||||| ||||||||| |||| |||| ||||||||||||||| Sbjct 2390401 CCAGGCATAGTTCATCATCTTTCCGGTCCTAACACATGTGCTCATGCTCCACCTCCCCGG 2390342 Query 901 CGCG 904 |||| Sbjct 2390341 CGCG 2390338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2860097291862