Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= NC_006432.1 Length=18875 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-15 >seq3 Length=527952102 Score = 95.1 bits (104), Expect = 1e-15 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 13418 TAGTTTTGTCACAGACCTGGAAAAATACAATCTGGCCTTCAGGTATGAATTCACAGCTCC 13477 |||||| |||| ||| ||||||| | ||||| |||||| ||| | || ||| | Sbjct 99735176 TAGTTTCATCACCAACCAGGAAAAACATAATCTTGCCTTCCTTTATAAGTTTACATGCCA 99735117 Query 13478 CTTCATCAAATATTGCAACCAATGCTATGGGGTTCGCAATGTCTTTGATTGGATGCACTT 13537 ||||| ||||| || | ||| |||| || |||| ||||| |||| ||||| || Sbjct 99735116 ATTCATTGAATATGCTAATAAGTGCCATGGCATTATCAATCTCTTTAATTGAATGCATTT 99735057 Query 13538 CCTAATTCCGCAATGTTACATGCATGTTAGTGATTATTATAACCCACCACAT 13589 | |||| || || ||| |||||| ||| |||||||||||| || | |||| Sbjct 99735056 CTTAATACCTAAACATTATATGCATATTAATGATTATTATAATCCTCTACAT 99735005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 60278103817904