Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq4776 219 3e-53 seq37522 187 2e-43 >seq4776 Length=5589 Score = 219 bits (242), Expect = 3e-53 Identities = 207/263 (79%), Gaps = 1/263 (0%) Strand=Plus/Minus Query 4994 ATGTGCAGCCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGT 5053 ||||||||| | || || || ||||| ||||||||||||||||| | || || | | Sbjct 3331 ATGTGCAGCTG-TGTCAAGGGAAGCACAGGAGGTTTGAAATGGATCAAGAGTCTCAATAT 3273 Query 5054 GCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCA 5113 || ||||||||||| ||||| | | | |||||||||||||| | || || |||||| Sbjct 3272 GCTTGATACTGTGCTAAGTGTGACAAAATATATCCTGCTGAGGAAAGCGATTTCTGGGCA 3213 Query 5114 GAGTCGAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTAT 5173 |||| ||||||||||| ||||| ||||| || |||| |||||||||||| || ||| Sbjct 3212 GAGTTAAGCATGTTGGGTCTCAAGATCACTTATTTTGTCAAGATGGATGGAAAAGTATAT 3153 Query 5174 GATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTC 5233 | |||||||| |||||||| | ||||| |||||| || | |||||||||||||||||| Sbjct 3152 AACATCACAGAATGGGCTGGGTACCAGCTTGTGGGGATTTACCCAGATACCCACAGAGTT 3093 Query 5234 CCTTGTCACATCTCATTTGGTTC 5256 || ||||| ||||||||| || Sbjct 3092 CCCCATCACACCTCATTTGGGTC 3070 >seq37522 Length=85016 Score = 187 bits (206), Expect = 2e-43 Identities = 139/163 (85%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 ||||| ||||||||||| || || || || ||| |||||||||||||||| || | | Sbjct 28099 AGGAGATTTGAAATGGATCGAGAGTCTCAGTATGCTCGATACTGTGCTGAGTGCAACAAG 28158 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| Sbjct 28159 ATGCATCCTGCTGAGGAAGGTGACTTCTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 28218 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183 || || ||||| ||||||||||||| || ||||| ||||||| Sbjct 28219 ACTTATTTTGCCATGATGGATGGAAAAGTATATGACATCACAG 28261 Score = 105 bits (116), Expect = 5e-19 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 5181 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGTC 5240 |||| |||||||| |||||||||||||| || ||||| ||||||||||||||||| | || Sbjct 29915 CAGAATGGGCTGGGTGCCAGCGTGTGGGGATTTCCCCTGATACCCACAGAGTCCCCTATC 29974 Query 5241 ACATCTCATTTGGTTCACGGATGCCT 5266 ||||||||||||| || ||| | ||| Sbjct 29975 ACATCTCATTTGGGTCCCGGTTTCCT 30000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39993060138948