Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq4776 237 1e-58 seq37522 190 2e-44 >seq4776 Length=5589 Score = 237 bits (262), Expect = 1e-58 Identities = 226/288 (78%), Gaps = 1/288 (0%) Strand=Plus/Minus Query 4967 ATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGG 5026 |||||||| |||||||||| | | || || || ||||| ||||||||||||||||| | Sbjct 3343 ATGAATACTATGATGTGCAGCTG-TGTCAAGGGAAGCACAGGAGGTTTGAAATGGATCAA 3285 Query 5027 GAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGT 5086 || || | ||| ||||||||||| ||||| | | | |||||||||||||| | Sbjct 3284 GAGTCTCAATATGCTTGATACTGTGCTAAGTGTGACAAAATATATCCTGCTGAGGAAAGC 3225 Query 5087 GACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGAT 5146 || || |||||||||| |||||||||||| ||||| ||||| || |||| ||||||| Sbjct 3224 GATTTCTGGGCAGAGTTAAGCATGTTGGGTCTCAAGATCACTTATTTTGTCAAGATGGAT 3165 Query 5147 GGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGAT 5206 ||||| || ||| | |||||||| |||||||| | ||||| |||||| || | ||||||| Sbjct 3164 GGAAAAGTATATAACATCACAGAATGGGCTGGGTACCAGCTTGTGGGGATTTACCCAGAT 3105 Query 5207 ACCCACAGAGTCCCTTATCACATCCCATTTGGTTCACGGATGCCAGGT 5254 ||||||||||| || |||||| | ||||||| || || | || ||| Sbjct 3104 ACCCACAGAGTTCCCCATCACACCTCATTTGGGTCCTGGGTTCCTGGT 3057 >seq37522 Length=85016 Score = 190 bits (210), Expect = 2e-44 Identities = 140/163 (86%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||| ||||||||||| || || || || ||| |||||||||||||||| || | | Sbjct 28099 AGGAGATTTGAAATGGATCGAGAGTCTCAGTATGCTCGATACTGTGCTGAGTGCAACAAG 28158 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 28159 ATGCATCCTGCTGAGGAAGGTGACTTCTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 28218 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 || || ||||| ||||||||||||| || ||||| ||||||| Sbjct 28219 ACTTATTTTGCCATGATGGATGGAAAAGTATATGACATCACAG 28261 Score = 107 bits (118), Expect = 2e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225 |||| |||||||| |||||||||||||| || ||||| ||||||||||||||||| |||| Sbjct 29915 CAGAATGGGCTGGGTGCCAGCGTGTGGGGATTTCCCCTGATACCCACAGAGTCCCCTATC 29974 Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGT 5254 ||||| ||||||| || ||| | || ||| Sbjct 29975 ACATCTCATTTGGGTCCCGGTTTCCTGGT 30003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40085570208664