Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= NC_001461.1
Length=12573
Score E
Sequences producing significant alignments: (Bits) Value
seq38 190 2e-44
>seq38
Length=18080598
Score = 190 bits (210), Expect = 2e-44
Identities = 140/163 (86%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080
||||||||||||||||| || || || || |||| |||||||||||||||| || | |
Sbjct 641410 AGGAGGTTTGAAATGGATCGAGAGTCTCAGTGTGCTCGATACTGTGCTGAGTGCAACAAG 641351
Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct 641350 ATGCATCCTGCTGAGGAAGGTGACTTCTGGGCAGAGTCAAGCATGTTGGGCCTCAAGATC 641291
Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5183
|| || ||||| ||||||||||||| | ||||| |||||||
Sbjct 641290 ACTTATTTTGCCATGATGGATGGAAAAATATATGACATCACAG 641248
Score = 104 bits (114), Expect = 2e-18
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 5180 ACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTGT 5239
||||| |||||||| |||||||||||||| || |||||||||||||||||||| || | |
Sbjct 640793 ACAGAATGGGCTGGGTGCCAGCGTGTGGGGATTTCCCCAGATACCCACAGAGTGCCCTAT 640734
Query 5240 CACATCTCATTTGGTTC 5256
|||||||||||||| ||
Sbjct 640733 CACATCTCATTTGGGTC 640717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40117539761208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |