Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq264123 118 6e-24 seq188047 118 6e-24 seq158566 118 6e-24 seq74702 118 6e-24 seq90511 114 7e-23 seq256162 78.8 5e-12 seq253556 77.0 2e-11 >seq264123 Length=893400 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 108598 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 108657 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 108658 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 108684 >seq188047 Length=629 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 280 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 221 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 220 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 194 >seq158566 Length=607 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 102 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 43 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 42 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 16 >seq74702 Length=729 Score = 118 bits (130), Expect = 6e-24 Identities = 84/91 (92%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 189 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCC 130 Query 897 CCGACGCGGTCGGGTCGTAGTACGGGCCGGT 927 ||| ||||| |||| || || |||||||||| Sbjct 129 CCGGCGCGG-CGGG-CG-AG-ACGGGCCGGT 103 >seq90511 Length=358 Score = 114 bits (126), Expect = 7e-23 Identities = 82/89 (92%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 839 GCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCCCC 898 ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 205 GCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACACGTGCGCTCGTGCTCCACCTCCCC 146 Query 899 GACGCGGTCGGGTCGTAGTACGGGCCGGT 927 | ||||| |||| || || |||||||||| Sbjct 145 GGCGCGG-CGGG-CG-AG-ACGGGCCGGT 121 >seq256162 Length=404384 Score = 78.8 bits (86), Expect = 5e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||| ||||||||| || ||||||| ||||||||| |||||||||||| Sbjct 319509 CTGCCCAGGCATAGCTCACCATCTGTCAGGTCCTACAACATGCGCTCATGCTCCACCTCC 319568 Query 897 C 897 | Sbjct 319569 C 319569 >seq253556 Length=264156 Score = 77.0 bits (84), Expect = 2e-11 Identities = 58/67 (87%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 832 CACTACTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCA 891 |||| ||||||||||| |||||||||||||| |||||||| | ||||| ||| |||| | Sbjct 42023 CACT-CTGCCCAGGCACAGTTCACCATCTTTTGGGTCCTAGCACATGCCCTCAGGCTCTA 42081 Query 892 CCTCCCC 898 ||||||| Sbjct 42082 CCTCCCC 42088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2852861483832