Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq24433 264 9e-67 seq21188 89.7 4e-14 >seq24433 Length=2176659 Score = 264 bits (292), Expect = 9e-67 Identities = 157/164 (96%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5005 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAG 5064 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 575432 TAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAACAG 575373 Query 5065 GCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAAT 5124 |||||||||||| |||||||| |||||||||||||||||||||||||||||||| || || Sbjct 575372 GCTGCATCCTGCAGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTGAAGAT 575313 Query 5125 CACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 |||||||||||| || |||||||||||||||||||||||||||| Sbjct 575312 CACCTACTTTGCACTCATGGATGGAAAGGTGTATGATATCACAG 575269 Score = 129 bits (142), Expect = 5e-26 Identities = 106/127 (83%), Gaps = 3/127 (2%) Strand=Plus/Minus Query 5166 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATC 5225 |||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| Sbjct 575180 CAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCATAAAGTCCCCTATC 575121 Query 5226 ACATCCCATTTGGTTCACGGATGCCAGGTACCAGCGACCAGAGAGAGGAATGTGAGGGTT 5285 | ||| |||||||||| || || ||||| ||||| | | | ||||| | || || | Sbjct 575120 ATATCTCATTTGGTTCTCGTATCCCAGGCTCCAGC-AGCCGGCAGAGGTACGT--GGTAT 575064 Query 5286 TTCTCCA 5292 ||||||| Sbjct 575063 TTCTCCA 575057 >seq21188 Length=4371247 Score = 89.7 bits (98), Expect = 4e-14 Identities = 182/263 (69%), Gaps = 7/263 (3%) Strand=Plus/Minus Query 4991 TGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGT 5050 |||||||||||||| || |||||| ||||| ||| ||| |||| | ||| || | Sbjct 3110365 TGCCAGGGAAAGCACAGTAGGTTTTAAATGTACCAGGATTCTAAATATCCCAAATGTATT 3110306 Query 5051 GCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATG 5110 ||||||| || |||| |||||| |||||| || || | | ||| || || | Sbjct 3110305 GCTGAGTCCAACTGGCTTGATCCTGTTGAGGATGG-CACACCTCAGTAGAATCTAGACTT 3110247 Query 5111 TTGGGCCTCAAAATCACCTACTTTGCGCTGA-TGGATGGAAAGGTGTATGATATCACAGA 5169 ||| |||| | |||| || |||| |||| | || ||| |||| ||| |||| || Sbjct 3110246 CTGGACCTC-AGATCAGTTA-TTTGACCTGAGAGCAT--AAATGTGTGTGACATCATGGA 3110191 Query 5170 GTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGATACCCACAGAGTCCCTTATCACAT 5229 |||||||| | ||| || |||| ||||| ||| ||||| || |||| | ||||| Sbjct 3110190 ATGGGCTGGGTACCAATTTGGAGGAACCTCCCTAGAGACCCA-AGGGTCCTGCAGCACAT 3110132 Query 5230 CCCATTTGGTTCACGGATGCCAG 5252 | || || ||| | | | |||| Sbjct 3110131 CTCACTTTATTCTCTGGTCCCAG 3110109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40190137825816