Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq3082 109 4e-20 >seq3082 Length=371252 Score = 109 bits (120), Expect = 4e-20 Identities = 130/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 5015 AAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGT 5074 || || ||| ||||||| ||| ||||||| || ||| ||| | ||||| || ||||| Sbjct 352714 AACCACAGGCGGTTTGAGATGAACCGGGACCCACTGAGCGCCCGGTACTGCGCCGAGTGC 352655 Query 5075 AATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTC 5134 | |||| | || ||||| |||||| | ||||||||||| ||| | |||| || Sbjct 352654 GGCTGCTTGCACGCAGCCGAGGAGGGTGACCTGTGGGCAGAGTCCAGCCTCCTGGGGCTG 352595 Query 5135 AAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTggg 5189 || ||||||||||| || ||||||| || ||| | ||||| ||||| | ||||| Sbjct 352594 AAGATCACCTACTTCGCCATGATGGACGGGAAGATCTATGACATCAC-GGGTGGG 352541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40116941294976