Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq77707 109 4e-20 >seq77707 Length=1339 Score = 109 bits (120), Expect = 4e-20 Identities = 130/175 (74%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 5000 AAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGT 5059 || || ||| ||||||| ||| ||||||| || ||| ||| | ||||| || ||||| Sbjct 817 AACCACAGGCGGTTTGAGATGAACCGGGACCCACTGAGCGCCCGGTACTGCGCCGAGTGC 876 Query 5060 AATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTC 5119 | |||| | || ||||| |||||| | ||||||||||| ||| | |||| || Sbjct 877 GGCTGCTTGCACGCAGCCGAGGAGGGTGACCTGTGGGCAGAGTCCAGCCTCCTGGGGCTG 936 Query 5120 AAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174 || ||||||||||| || ||||||| || ||| | ||||| ||||| | ||||| Sbjct 937 AAGATCACCTACTTCGCCATGATGGACGGGAAGATCTATGACATCAC-GGGTGGG 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40128426953776