Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq173956 100 2e-17 >seq173956 Length=9602 Score = 100 bits (110), Expect = 2e-17 Identities = 128/175 (73%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 5000 AAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGT 5059 || || ||| |||| || ||| ||||||| || | | ||| | ||||| || ||||| Sbjct 5032 AACCACAGGCGGTTCGAGATGAACCGGGACCCGCTGTGCGCCCGGTACTGCGCCGAGTGC 4973 Query 5060 AATAGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTC 5119 | |||| | || ||||| |||||| | ||||||||||| ||| | |||| || Sbjct 4972 GGCCGCTTGCACGCGGCCGAGGAGGGTGACCTGTGGGCAGAGTCCAGCCTCCTGGGGCTG 4913 Query 5120 AAAATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174 || ||||||||||| || |||||||||| ||| | || || ||||| | ||||| Sbjct 4912 AAGATCACCTACTTCGCTATGATGGATGGGAAGATCTACGACATCAC-GGGTGGG 4859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40123986430960