Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq3881 78.8 5e-12 seq55482 77.0 2e-11 >seq3881 Length=9694 Score = 78.8 bits (86), Expect = 5e-12 Identities = 59/68 (87%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 832 CACTACTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCA 891 |||| |||||||||||||||||||||||||| |||||||| | || |||| |||||| Sbjct 5732 CACT-CTGCCCAGGCATAGTTCACCATCTTTTGGGTCCTAGCACAGATGCTCACGCTCCA 5674 Query 892 CCTCCCCG 899 |||||||| Sbjct 5673 CCTCCCCG 5666 >seq55482 Length=212936 Score = 77.0 bits (84), Expect = 2e-11 Identities = 57/65 (88%), Gaps = 4/65 (6%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTA--ACGCATGCGCTCGTGCTCCACCT 894 |||||||||||||||||||| |||||||||||||| ||| |||| | || |||||||| Sbjct 212927 CTGCCCAGGCATAGTTCACCGTCTTTCGGGTCCTAGCACGGATGCTCACG--CTCCACCT 212870 Query 895 CCCCG 899 ||||| Sbjct 212869 CCCCG 212865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2857727632218