Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq391399 116 3e-22 seq165474 116 3e-22 >seq391399 Length=695 Score = 116 bits (128), Expect = 3e-22 Identities = 128/169 (76%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 |||||||| || ||||||||||| || || ||| | ||||| || ||||| || Sbjct 7 AGGAGGTTCGAGATGGACCGGGACCCCCTCAGCGCCCGCTACTGCGCCGAGTGCGGCGGG 66 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 ||||| || || ||||| || ||||| ||||| ||||| ||| || |||| || || ||| Sbjct 67 CTGCACCCCGCCGAGGAGGGCGACTTCTGGGCCGAGTCCAGCCTGCTGGGGCTGAAGATC 126 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5189 |||||||| || ||||||| || ||| | || || ||||| | ||||| Sbjct 127 ACCTACTTCGCCATGATGGACGGGAAGATCTACGACATCAC-GGGTGGG 174 >seq165474 Length=1558 Score = 116 bits (128), Expect = 3e-22 Identities = 128/169 (76%), Gaps = 1/169 (1%) Strand=Plus/Minus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 |||||||| || ||||||||||| || || ||| | ||||| || ||||| || Sbjct 1245 AGGAGGTTCGAGATGGACCGGGACCCCCTCAGCGCCCGCTACTGCGCCGAGTGCGGCGGG 1186 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 ||||| || || ||||| || ||||| ||||| ||||| ||| || |||| || || ||| Sbjct 1185 CTGCACCCCGCCGAGGAGGGCGACTTCTGGGCCGAGTCCAGCCTGCTGGGGCTGAAGATC 1126 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5189 |||||||| || ||||||| || ||| | || || ||||| | ||||| Sbjct 1125 ACCTACTTCGCCATGATGGACGGGAAGATCTACGACATCAC-GGGTGGG 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39890288231892