Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_030697.1 Length=9808 Score E Sequences producing significant alignments: (Bits) Value seq57150 84.2 1e-12 seq281383 78.8 6e-11 seq44509 78.8 6e-11 >seq57150 Length=6005 Score = 84.2 bits (92), Expect = 1e-12 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAA-AGTGTAAATCCCGGGGGTCGCCGGATCCTTaa 9725 |||||||||||||||||| ||||||| |||||| ||| ||| |||||||| ||| |||| Sbjct 5668 GATCGGAAGAGCGTCGTGTAGGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAA 5727 Query 9726 aaaaaaCA 9733 |||||||| Sbjct 5728 AAAAAACA 5735 >seq281383 Length=273 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 203 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 262 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 263 AAAAAAAA 270 >seq44509 Length=7634 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 ||||||||||||||||||| |||||| ||||| |||||||||| ||||| | | |||| Sbjct 182 GATCGGAAGAGCGTCGTGGTGGGGAAGGGTGTAGATCCCGGGGGGCGCCGTAGCTATAAA 123 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 122 AAAAAAAA 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31092597639152