Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Columba_20livia_20[refseq_20GCF_5F000337935.1_202013-02-11]
14,923 sequences; 1,107,989,085 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq1348 118 9e-23
>seq1348
Length=105407
Score = 118 bits (130), Expect = 9e-23
Identities = 130/172 (76%), Gaps = 1/172 (1%)
Strand=Plus/Minus
Query 5003 CATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAAT 5062
|| |||||||| || |||| ||||| || |||||| | ||||| || |||||
Sbjct 93969 CACAGGAGGTTCGAGCTGGAGCGGGACCCGCTGAGTGCGCGGTACTGCGCGGAGTGCGGG 93910
Query 5063 AGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAA 5122
||||||| ||||||||||| || ||||| ||||| ||||| || | |||| || |||
Sbjct 93909 GGGCTGCACCCTGCTGAGGAGGGCGACTTCTGGGCCGAGTCCAGTCTCCTGGGACTGAAA 93850
Query 5123 ATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174
||||||||| | || ||||||| || ||| | || || ||||||| |||||
Sbjct 93849 ATCACCTACCTGGCCATGATGGAGGGGAAGATCTACGACATCACAG-GTGGG 93799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40204449192952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |