Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq216401 84.2 1e-13 seq409077 77.0 2e-11 >seq216401 Length=149 Score = 84.2 bits (92), Expect = 1e-13 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct 13 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTCC 72 Query 897 CCGA 900 |||| Sbjct 73 CCGA 76 >seq409077 Length=292 Score = 77.0 bits (84), Expect = 2e-11 Identities = 59/69 (86%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 |||||||||||||||||||||||||| |||||||| | || | ||| |||||||||| Sbjct 13 CTGCCCAGGCATAGTTCACCATCTTTGGGGTCCTAGCACAGACACTCACACTCCACCTCC 72 Query 897 CCGACGCGG 905 |||| |||| Sbjct 73 CCGA-GCGG 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2838122402640