Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gallus_20gallus_20[refseq_20GCF_5F000002315.4_202015-12-16]
23,475 sequences; 1,230,258,557 total letters
Query= NC_003678.1
Length=12602
Score E
Sequences producing significant alignments: (Bits) Value
seq1781 140 3e-29
seq7393 134 1e-27
>seq1781
Length=149560735
Score = 140 bits (154), Expect = 3e-29
Identities = 193/272 (71%), Gaps = 10/272 (4%)
Strand=Plus/Minus
Query 4967 ATGAATACGATGATGTGCAACCGATGCCAGGGAAAGCATAGGAGGTTTGAAATGGACCGG 5026
||||| || | |||||||| | |||||||| ||||| || ||||| || ||| |||
Sbjct 72269920 ATGAACACCACGATGTGCAGCAAGTGCCAGGGCAAGCACAGAAGGTTCGAGATGTACCAT 72269861
Query 5027 GAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGGCTGCATCCTGCTGAGGAAGGT 5086
|| || | || ||| |||| || | ||||| | || ||||| ||
Sbjct 72269860 GAGCCCAC----------TATTGTTCTGAATGCAGCCAACTGCACGCCGCCGAGGAGGGC 72269811
Query 5087 GACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATCACCTACTTTGCGCTGATGGAT 5146
||| | ||||| ||||| ||| || |||| | || |||||||| ||||| || ||||
Sbjct 72269810 GACCTGTGGGCTGAGTCCAGCCTGCTGGGGATGAAGATCACCTATTTTGCCATGGTGGAC 72269751
Query 5147 GGAAAGGTGTATGATATCACAGAGTGGGCTGGATGCCAGCGTGTGGGAATCTCCCCAGAT 5206
|| ||||| || || ||||||||||||||||| || ||||| |||| |||| ||| ||
Sbjct 72269750 GGCAAGGTCTACGACATCACAGAGTGGGCTGGGTGTCAGCGCATGGGGATCTGCCCGGAC 72269691
Query 5207 ACCCACAGAGTCCCTTATCACATCCCATTTGG 5238
|||||| | |||| | |||||| | || ||
Sbjct 72269690 ACCCACTGTGTCCTCAACCACATCTCCTTCGG 72269659
>seq7393
Length=129908
Score = 134 bits (148), Expect = 1e-27
Identities = 132/169 (78%), Gaps = 1/169 (1%)
Strand=Plus/Minus
Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065
||||||||||| |||||||| || || ||| ||| | || ||||||||||| | | |
Sbjct 65563 AGGAGGTTTGAGATGGACCGCGACCCACTGAGCGCCCGCTATTGTGCTGAGTGCAGTCAG 65504
Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125
||||| || || ||||| || ||| | ||||| ||||| ||| || |||| || || |||
Sbjct 65503 CTGCACCCCGCCGAGGAGGGCGACCTGTGGGCTGAGTCCAGCCTGCTGGGGCTGAAGATC 65444
Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174
||||||||||| ||||||| || ||||| || || ||||| | |||||
Sbjct 65443 ACCTACTTTGCCATGATGGACGGCAAGGTCTACGACATCAC-GGGTGGG 65396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40200580473400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |