Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Grus_20japonensis_20[genbank_20GCA_5F002002985.1_202017-02-10] 357,545 sequences; 1,265,634,512 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq74382 104 2e-18 >seq74382 Length=13477 Score = 104 bits (114), Expect = 2e-18 Identities = 125/169 (74%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 |||||||| || |||||||| || || || ||| | ||||| || ||||| ||| Sbjct 11686 AGGAGGTTCGAGATGGACCGCGACCCCCTCAGCGCCCGGTACTGCGCCGAGTGCGGCAGG 11745 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 | ||| || || || || || ||||| ||||| || || ||| || |||| || || ||| Sbjct 11746 CGGCACCCCGCCGAAGAGGGCGACTTCTGGGCCGAATCCAGCCTGCTGGGGCTGAAGATC 11805 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174 |||||||| || ||||||| || ||| | || || ||||| | ||||| Sbjct 11806 ACCTACTTCGCCATGATGGACGGGAAGATCTACGACATCAC-GGGTGGG 11853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40049455223080