Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haliaeetus_20leucocephalus_20[refseq_20GCF_5F000737465.1_202014-08- 04] 1,023 sequences; 1,178,409,481 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq187 131 1e-26 >seq187 Length=1295828 Score = 131 bits (144), Expect = 1e-26 Identities = 131/169 (78%), Gaps = 1/169 (1%) Strand=Plus/Minus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||| |||||||| || || |||||| | |||||||| |||||| || Sbjct 705570 AGGAGGTTTGAGATGGACCGAGACCCCCTCAGTGCCCGCTACTGTGCCGAGTGTGGCGGG 705511 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 ||||| ||||| ||||| |||||||| ||||| || || ||| || |||| || || ||| Sbjct 705510 CTGCACCCTGCCGAGGAGGGTGACTTCTGGGCCGAATCCAGCCTGCTGGGGCTGAAGATC 705451 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5174 |||||||| || ||||||| || || | || || ||||| | ||||| Sbjct 705450 ACCTACTTCGCCATGATGGACGGGAAAATCTACGACATCAC-GGGTGGG 705403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40210737219352