Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_003678.1 Length=12602 Score E Sequences producing significant alignments: (Bits) Value seq6691 136 3e-28 >seq6691 Length=29209805 Score = 136 bits (150), Expect = 3e-28 Identities = 128/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5006 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5065 ||||||||||| |||||||| || || |||||| | || ||||||||||| | | Sbjct 2396471 AGGAGGTTTGAGATGGACCGTGACCCGCTCAGTGCCCGCTATTGTGCTGAGTGCAGCCAG 2396530 Query 5066 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAAATC 5125 ||||| || || ||||| || ||| | ||||| ||||| ||| || |||| || || ||| Sbjct 2396531 CTGCACCCCGCCGAGGAGGGCGACCTGTGGGCTGAGTCCAGCCTGCTGGGGCTGAAGATC 2396590 Query 5126 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAG 5168 ||||||||||| |||||||||| ||||| || || ||||||| Sbjct 2396591 ACCTACTTTGCCATGATGGATGGCAAGGTCTACGACATCACAG 2396633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40106571764464