Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_004908.1 Length=1714 Score E Sequences producing significant alignments: (Bits) Value seq44614 96.9 4e-17 >seq44614 Length=456 Score = 96.9 bits (106), Expect = 4e-17 Identities = 134/185 (72%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 1313 GACGTATGGGCATATAATGCAGAATTGCTAGTACTACTTGAAAATCAAAAAACACTCGAT 1372 ||||| ||| |||| ||||| |||||||| || || |||||||| ||| |||||| || Sbjct 324 GACGTTTGGACATACAATGCTGAATTGCTGGTTCTTCTTGAAAACGAAAGAACACTAGAC 265 Query 1373 GAGCATGATGCGAACGTGAACAATCTATATAACAAGGTGAAGAGGGCACT---GGGCTCC 1429 |||||||||||| ||||| || |||||| | || || || | ||| | ||| | Sbjct 264 CTGCATGATGCGAATGTGAAGAACCTATATGAAAAAGTCAA-ATCGCAATTAAGGG--AC 208 Query 1430 AATGCTATGGAAGATGGGAAAGGCTGTTTCGAGCTATACCATAAATGTGATGATCAGTGC 1489 ||||||| || || || || || || || | | ||||||||||| || ||||| Sbjct 207 AATGCTAATGATCTAGGAAATGGGTGCTTTGAATTCTGGCATAAATGTGACAATGAGTGC 148 Query 1490 ATGGA 1494 || || Sbjct 147 ATAGA 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5362788943680