Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_007362.1 Length=1760 Score E Sequences producing significant alignments: (Bits) Value seq44614 228 9e-57 >seq44614 Length=456 Score = 228 bits (252), Expect = 9e-57 Identities = 292/397 (74%), Gaps = 4/397 (1%) Strand=Plus/Minus Query 1195 GATGGAGTCACCAATAAGGTCAACTCGATCATTGACAAAATGAACACTCAGTTTGAGGCC 1254 || ||| | || ||||| ||||| || |||||||||||||||||||| || |||||||| Sbjct 456 GACGGAATTACAAATAAAGTCAATTCCATCATTGACAAAATGAACACACAATTTGAGGCT 397 Query 1255 GTTGGAAGGGAATTTAATAACTTGGAAAGGAGGATAGAGAATTTAAACAAGCAGATGGAA 1314 |||| |||||| || |||| || || || || ||| | ||||| |||||| Sbjct 396 GTTGACCACGAATTTTCAAATCTGGAGAGAAGAATTGACAATCTGAACAAAAGAATGGAA 337 Query 1315 GACGGATTCCTAGATGTCTGGACTTATAATGCTGAACTTCTGGTTCTCATGGAAAATGAG 1374 ||||| || || || || ||||| || ||||||||| | |||||||| | ||||| || Sbjct 336 GACGGGTTTCTGGACGTTTGGACATACAATGCTGAATTGCTGGTTCTTCTTGAAAACGAA 277 Query 1375 AGAACTCTAGACTTTCATGACTCAAATGTCAAGAACCTTTATGACAAGGTCCGACTACAG 1434 ||||| |||||| | ||||| | ||||| |||||||| ||||| || ||| | || Sbjct 276 AGAACACTAGACCTGCATGATGCGAATGTGAAGAACCTATATGAAAAAGTCAAATCGCAA 217 Query 1435 CTTAGGGATAATGCAAAGGAGCTGGGTAATGGTTGTTTCGAGTTCTATCACAAATGTGAT 1494 | ||||| ||||| || || || || ||||| || || || |||| || |||||||| Sbjct 216 TTAAGGGACAATGCTAATGATCTAGGAAATGGGTGCTTTGAATTCTGGCATAAATGTGAC 157 Query 1495 AATGAATGTATGGAAAGTGTAAAAAACGGAACGTATGACTACCCGCAGTATTCAGAAGA- 1553 ||||| || || || ||| ||||| || || |||||||| || | || || || Sbjct 156 AATGAGTGCATAGAGTCTGTCAAAAATGGTACCTATGACTATCCCAAATACCAGGACGAG 97 Query 1554 AGCAAGACTAAACAGAGAGGAAATA-AGTGGAGTAAA 1589 || || | ||||||| |||||||| ||| | ||||| Sbjct 96 AGTAA-ATTAAACAGGCAGGAAATAGAGTCG-GTAAA 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5509627212376