Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_007366.1 Length=1762 Score E Sequences producing significant alignments: (Bits) Value seq140661 673 0.0 >seq140661 Length=595 Score = 673 bits (746), Expect = 0.0 Identities = 500/581 (86%), Gaps = 5/581 (1%) Strand=Plus/Minus Query 1186 CTCAAGCAGCAATCAACCAAATCAATGGGAAGCTGAATAGGTTGATCGGGAAAACAAACG 1245 ||||||| || ||| |||| |||||||| || ||||| | | |||| ||||||||| | Sbjct 595 CTCAAGCCGCCATCGACCAGATCAATGGAAAACTGAACCGAGTAATCGAGAAAACAAATG 536 Query 1246 AGAAATTCCATCAGATTGAAAAAGAATTCTCAGAAGTAGAAGGGAGAATTCAGGACCTCG 1305 | || || ||||||||||| || || || ||||| || ||||| |||||||| ||||| | Sbjct 535 AAAAGTTTCATCAGATTGAGAAGGAGTTTTCAGAGGTGGAAGGAAGAATTCAAGACCTTG 476 Query 1306 AGAAATATGTTGAGGACACTAAAATAGATCTCTGGTCATACAACGCGGAGCTTCTTGTGG 1365 |||||||||| || ||||| ||||||||||| ||||| ||||| ||||| |||||||||| Sbjct 475 AGAAATATGTCGAAGACACCAAAATAGATCTATGGTCTTACAATGCGGAACTTCTTGTGG 416 Query 1366 CCCTGGAGAACCAACATACAATTGATCTAACTGACTCAGAAATGAACAAACTGTTTGAAA 1425 | ||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct 415 CGCTGGAAAACCAGCATACAATTGATCTGACTGATTCAGAAATGAACAAACTATTTGAAA 356 Query 1426 GAACAAAGAAG-CAACTGAGGGAAAATGCTGAGGATATGGGCAATGGTTGTTTCAAAATA 1484 ||||| |||| || ||||||||||||||||| || ||||| ||||| |||||||||||| Sbjct 355 AAACAA-GAAGACAGCTGAGGGAAAATGCTGAAGACATGGGGAATGGCTGTTTCAAAATA 297 Query 1485 TACCACAAATGTGACAATGCCTGCATAGGGTCAATCAGAAATGGAACTTATGACCATGAT 1544 || ||||||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||| Sbjct 296 TATCACAAATGTGACAATGCTTGCATAGAGTCAATCAGGAATGGGACCTATGATCATGAC 237 Query 1545 GTATACAGAGATGAAGCATTAAACAACCGGTTCCAGATCAAAGGTGTTGAGTTGAAGTCA 1604 |||||||| || |||||| |||| || || ||||||||||| ||||| || |||| || Sbjct 236 GTATACAGGGACGAAGCACTAAATAATCGATTCCAGATCAAGGGTGTGGAACTGAAATCC 177 Query 1605 GGATACAAAGATTGGATCCTATGGATTTCCTTTGCCATATCATGTTTTTTGCTTTGTGTT 1664 ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| Sbjct 176 GGATACAAAGATTGGATTCTATGGATTTCCTTTGCCATATCATGCTTTTTGCTGTGTGTT 117 Query 1665 GCTTTGTTGGGGTTCATCATGTGGGCCTGCCAAAAAGGCAACATTAGGTGCAACATTTGC 1724 | | | |||| |||||||||||||||||||| | |||||| |||||||||||||||||| Sbjct 116 GTTCTACTGGGATTCATCATGTGGGCCTGCCAGAGAGGCAATATTAGGTGCAACATTTGC 57 Query 1725 ATTTGAGTGCAT---TAATTAAAAACACCCTTGTTTCTACT 1762 |||||||| ||| |||||||||||||||||||||||||| Sbjct 56 ATTTGAGTACATTAATAATTAAAAACACCCTTGTTTCTACT 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5516011484928