Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_026425.1 Length=1708 Score E Sequences producing significant alignments: (Bits) Value seq140661 165 9e-38 >seq140661 Length=595 Score = 165 bits (182), Expect = 9e-38 Identities = 310/450 (69%), Gaps = 8/450 (2%) Strand=Plus/Minus Query 1139 CTCAATCGGCAATTGATCAAATAACAGGAAAATTAAACCGGCTTATAGAAAAAACCAACC 1198 ||||| | || || || || || | |||||| | ||||| | || || ||||| || Sbjct 595 CTCAAGCCGCCATCGACCAGATCAATGGAAAACTGAACCGAGTAATCGAGAAAACAAATG 536 Query 1199 AACAATTTGAGTTGATAGACAATGAATTCAATGAGGTAGA--GAAGCAAATCGGTAATGT 1256 || | ||| | ||| || || || || ||||| || |||| || || | | Sbjct 535 AAAAGTTTCATCAGATTGAGAAGGAGTTTTCAGAGGTGGAAGGAAG-AATTCAAGACCTT 477 Query 1257 GATAAATTGGACCAGAGATTCTATAACAGAAGTGTGGTCATACAATGCTGAACTCTTGGT 1316 || |||| | | | ||| | | || ||| | ||||| |||||||| ||||| | || Sbjct 476 GAGAAATATGTCGA-AGACACCAAAATAGATCTATGGTCTTACAATGCGGAACTTCTTGT 418 Query 1317 AGCAATGGAGAACCAGCATACAATTGATCTGGCTGATTCAGAAATGGACAAACTGTACGA 1376 || |||| ||||||||||||||||||||| |||||||||||||| ||||||| | || Sbjct 417 GGCGCTGGAAAACCAGCATACAATTGATCTGACTGATTCAGAAATGAACAAACTATTTGA 358 Query 1377 ACGAGTGAAAAGACAGCTGAGAGAGAATGCTGAAGAAGATGGCACTGGTTGCTTTGAAAT 1436 | | | |||||||||||| || ||||||||||| || | ||| || || |||| Sbjct 357 AAAAACAAGAAGACAGCTGAGGGAAAATGCTGAAGACATGGGGAATGGCTGTTTCAAAAT 298 Query 1437 ATTTCACAAGTGTGATGATGACTGTATGGCCAGT--ATTAGAAATAACACCTATGATCAC 1494 || |||||| ||||| ||| || || | ||| || || ||| ||||||||||| Sbjct 297 ATATCACAAATGTGACAATGCTTGCATAG--AGTCAATCAGGAATGGGACCTATGATCAT 240 Query 1495 AGCAAATACAGGGAAGAGGCAATGCAAAATAGAATACAGATTGACCCAGTCAAACTAAGC 1554 | ||||||||| || ||| | | ||| || | ||||| | || |||| | Sbjct 239 GACGTATACAGGGACGAAGCACTAAATAATCGATTCCAGATCAAGGGTGTGGAACTGAAA 180 Query 1555 AGCGGCTACAAAGATGTGATACTTTGGTTT 1584 ||| ||||||||| ||| || ||| || Sbjct 179 TCCGGATACAAAGATTGGATTCTATGGATT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5343636126024