Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_026433.1 Length=1701 Score E Sequences producing significant alignments: (Bits) Value seq44614 221 1e-54 >seq44614 Length=456 Score = 221 bits (244), Expect = 1e-54 Identities = 292/403 (72%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 1168 GACGAGATTACTAACAAAGTAAATTCTGTTATTGAAAAGATGAATACACAGTTCACAGCA 1227 |||| ||||| || ||||| ||||| | ||||| || ||||| ||||| || || Sbjct 456 GACGGAATTACAAATAAAGTCAATTCCATCATTGACAAAATGAACACACAATTTGAGGCT 397 Query 1228 GTAGGTAAAGAGTT--CAACCACCTGGAAAAAAGAATAGAGAATTTAAATAAAAAAGTTG 1285 || | | || || ||| | ||||| | |||||| || ||| | || |||| | | | Sbjct 396 GTTGACCACGAATTTTCAA--ATCTGGAGAGAAGAATTGACAATCTGAACAAAAGAATGG 339 Query 1286 ATGATGGTTTCCTGGACATTTGGACTTACAATGCCGAACTGTTGGTTCTATTGGAAAATG 1345 | || || || |||||| ||||||| |||||||| ||| || ||||||| | ||||| | Sbjct 338 AAGACGGGTTTCTGGACGTTTGGACATACAATGCTGAATTGCTGGTTCTTCTTGAAAACG 279 Query 1346 AAAGAACTTTGGACTACCACGATTCAAATGTGAAGAACTTATATGAAAAGGTAAGAAGCC 1405 ||||||| | ||| || ||| | |||||||||||| |||||||||| || | | | Sbjct 278 AAAGAACACTAGACCTGCATGATGCGAATGTGAAGAACCTATATGAAAAAGTCAAATCGC 219 Query 1406 AGCTAAAAAACAATGCCAAGGAAATTGGAAACGGCTGCTTTGAATTTTACCACAAATGCG 1465 | ||| ||||||| || || | ||||| || ||||||||||| | || ||||| | Sbjct 218 AATTAAGGGACAATGCTAATGATCTAGGAAATGGGTGCTTTGAATTCTGGCATAAATGTG 159 Query 1466 ATAACACGTGCATGGAAAGTGTCAAAAATGGGACTTATGACTACCCAAAATACTCAGAGG 1525 | || |||||| || |||||||||||| || |||||||| || |||||| || | Sbjct 158 ACAATGAGTGCATAGAGTCTGTCAAAAATGGTACCTATGACTATCCCAAATACCAGGACG 99 Query 1526 AAGCAAAATTAAACAGAGAAGAAATAGATGGGGTAAAGCTGGA 1568 | ||||||||||| | |||||||| ||||||||| || Sbjct 98 AGAGTAAATTAAACAGGCAGGAAATAGAGTCGGTAAAGCTAGA 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5321291172092