Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq17931 122 7e-24 >seq17931 Length=26661 Score = 122 bits (134), Expect = 7e-24 Identities = 131/172 (76%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 5018 CATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAAT 5077 || |||||||| || |||||||| || || || ||| | ||||| || ||||| Sbjct 23949 CACAGGAGGTTCGAGATGGACCGAGACCCCCTCAGCGCCCGCTACTGCGCCGAGTGCGGC 23890 Query 5078 AGGCTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAA 5137 |||||||| || || ||||| |||||||| ||||| ||||| ||| || |||| || || Sbjct 23889 AGGCTGCACCCCGCCGAGGAGGGTGACTTCTGGGCTGAGTCCAGCCTGCTGGGGCTGAAG 23830 Query 5138 ATCACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5189 ||||||||||| || ||||||| || ||| | || || ||||| | ||||| Sbjct 23829 ATCACCTACTTCGCCATGATGGACGGGAAGATCTACGACATCAC-GGGTGGG 23779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39998181403152