Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Numida_20meleagris_20[refseq_20GCF_5F002078875.1_202017-06-01] 2,466 sequences; 1,043,264,150 total letters Query= NC_001461.1 Length=12573 Score E Sequences producing significant alignments: (Bits) Value seq1793 125 6e-25 >seq1793 Length=224333 Score = 125 bits (138), Expect = 6e-25 Identities = 130/169 (77%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 5021 AGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCTGAGTGTAATAGG 5080 |||||||| || |||||||| || || || ||| | ||||| |||||||| | | Sbjct 66181 AGGAGGTTCGAGATGGACCGTGACCCGCTCAGCGCCCGCTACTGCGCTGAGTGCAGCCAG 66240 Query 5081 CTGCATCCTGCTGAGGAAGGTGACTTTTGGGCAGAGTCGAGCATGTTGGGCCTCAAAATC 5140 ||||| || || ||||| || ||| | ||||| ||||| ||| || |||| || || ||| Sbjct 66241 CTGCACCCCGCCGAGGAGGGCGACCTGTGGGCCGAGTCCAGCCTGCTGGGGCTGAAGATC 66300 Query 5141 ACCTACTTTGCGCTGATGGATGGAAAGGTGTATGATATCACAGAGTGGG 5189 ||||||||||| |||||||||| ||||| || || ||||| | ||||| Sbjct 66301 ACCTACTTTGCCATGATGGATGGCAAGGTCTACGACATCAC-GGGTGGG 66348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40117287015288