Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_018464.1 Length=927 Score E Sequences producing significant alignments: (Bits) Value seq291434 82.4 4e-13 seq291433 82.4 4e-13 seq287897 82.4 4e-13 seq287896 82.4 4e-13 seq219461 82.4 4e-13 seq249545 77.0 2e-11 seq105104 77.0 2e-11 >seq291434 Length=897 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct 148 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTCC 89 Query 897 CCG 899 ||| Sbjct 88 CCG 86 >seq291433 Length=869 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct 157 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTCC 98 Query 897 CCG 899 ||| Sbjct 97 CCG 95 >seq287897 Length=814 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct 195 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTCC 136 Query 897 CCG 899 ||| Sbjct 135 CCG 133 >seq287896 Length=919 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct 354 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTCC 295 Query 897 CCG 899 ||| Sbjct 294 CCG 292 >seq219461 Length=1300 Score = 82.4 bits (90), Expect = 4e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 837 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTCC 896 ||||||||||||||||||||||||||||||||||| | | ||||| ||||||||||| Sbjct 955 CTGCCCAGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTCC 896 Query 897 CCG 899 ||| Sbjct 895 CCG 893 >seq249545 Length=615 Score = 77.0 bits (84), Expect = 2e-11 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 837 CTGCCCA-GGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTC 895 ||||||| |||||||||||||||||||||||||||| | | ||||| |||||||||| Sbjct 483 CTGCCCACGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTC 542 Query 896 CCCG 899 |||| Sbjct 543 CCCG 546 >seq105104 Length=567 Score = 77.0 bits (84), Expect = 2e-11 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 837 CTGCCCA-GGCATAGTTCACCATCTTTCGGGTCCTAACGCATGCGCTCGTGCTCCACCTC 895 ||||||| |||||||||||||||||||||||||||| | | ||||| |||||||||| Sbjct 500 CTGCCCACGGCATAGTTCACCATCTTTCGGGTCCTAGCACGGACGCTCACGCTCCACCTC 559 Query 896 CCCG 899 |||| Sbjct 560 CCCG 563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2851819591200